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FullText URL K0006343__abstract_review.pdf K0006343_fulltext.pdf K0006343_summary.pdf
Author Onomura, Daichi|
Published Date 2021-03-25
Content Type Thesis or Dissertation
Grant Number 甲第6343号
Granted Date 2021-03-25
Thesis Type Doctor of Philosophy in Medical Science
Grantor 岡山大学
language English
FullText URL fulltext20210519-1.pdf
Author Huang, Rongsheng| Fujimura, Atsushi| Nakata, Eiji| Takihira, Shota| Inoue, Hirofumi| Yoshikawa, Soichiro| Hiyama, Takeshi| Ozaki, Toshifumi| Kamiya, Atsunori|
Keywords MPNST Cancer stem-like cells ADRB2 YAP/TAZ
Note (c) 2021 The Authors. This manuscript version is made available under the CC-BY-NC-ND 4.0 License. http://creativecommons.org/licenses/by-nc-nd/4.0/. This is the accepted manuscript version. The formal published version is available at [https://doi.org/10.1016/j.bbrc.2021.03.172] . |
Published Date 2021-6-11
Publication Title Biochemical and Biophysical Research Communications
Volume volume557
Publisher Elsevier BV
Start Page 199
End Page 205
ISSN 0006-291X
NCID AA00564395
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders (c) 2021 The Authors.
File Version author
PubMed ID 33872989
DOI 10.1016/j.bbrc.2021.03.172
Web of Science KeyUT 000641050500003
Related Url isVersionOf https://doi.org/10.1016/j.bbrc.2021.03.172
FullText URL fulltext.pdf
Author Inoue, Komaki| Takahagi, Kotaro| Kouzai, Yusuke| Koda, Satoru| Shimizu, Minami| Uehara-Yamaguchi, Yukiko| Nakayama, Risa| Kita, Toshie| Onda, Yoshihiko| Nomura, Toshihisa| Matsui, Hidetoshi| Nagaki, Kiyotaka| Nishii, Ryuei| Mochida, Keiichi|
Published Date 2020-09
Publication Title Nar Genomics and Bioinformatics
Volume volume2
Issue issue3
Publisher Oxford Univ Press
Start Page lqaa067
ISSN 2631-9268
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Author(s) 2020.
File Version publisher
PubMed ID 33575616
DOI 10.1093/nargab/lqaa067
NAID 120007037378
Web of Science KeyUT 000645609500016
Related Url isVersionOf https://doi.org/10.1093/nargab/lqaa067
FullText URL fulltext.pdf
Author Yamamoto, Maho| Kondo, Rina| Hozumi, Haruka| Doi, Seita| Denda, Miwako| Magari, Masaki| Kanayama, Naoki| Hatano, Naoya| Morishita, Ryo| Tokumitsu, Hiroshi|
Keywords S100 protein HMG20A protein-protein interaction Ca2+-signal transduction genome-wide screening
Published Date 2021-03-30
Publication Title Biomolecules
Volume volume11
Issue issue4
Publisher MDPI
Start Page 510
ISSN 2218-273X
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
File Version publisher
PubMed ID 33808200
DOI 10.3390/biom11040510
NAID 120007037385
Web of Science KeyUT 000642769800001
Related Url isVersionOf https://doi.org/10.3390/biom11040510
FullText URL fulltext.pdf
Author Higuchi, Yousuke| Hasegawa, Kosei| Futagawa, Natsuko| Yamashita, Miho| Tanaka, Hiroyuki| Tsukahara, Hirokazu|
Keywords COL1A1 COL1A2 IFITM5 Osteogenesis imperfecta variant
Note This is an Accepted Manuscript of an article published by Wiley|
Published Date 2021-05-03
Publication Title Molecular Genetics & Genomic Medicine
Publisher Wiley
Start Page e1675
ISSN 2324-9269
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
File Version publisher
PubMed ID 33939306
DOI 10.1002/mgg3.1675
NAID 120007037392
Web of Science KeyUT 000646270800001
Related Url isVersionOf https://doi.org/10.1002/mgg3.1675
FullText URL fulltext20210530_1.pdf
Author Laukhtina, Ekaterina| Pradere, Benjamin| Mori, Keiichiro| Schuettfort, Victor M.| Quhal, Fahad| Mostafaei, Hadi| Sari Motlangh, Reza| Katayama, Satoshi| Grossmann, Nico C.| Moschini, Marco| Enikeev, Dmitry| Shariat, Shahrokh F.|
Keywords Biomarkers UCB bladder cancer Neoadjuvant systemic therapy NAC systematic review
Published Date 2021-03-31
Publication Title Urologic Oncology: Seminars and Original Investigations
Volume volume39
Issue issue3
Publisher Elsevier
Start Page 180
End Page 190
ISSN 10781439
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2021 The Authors.
File Version publisher
PubMed ID 33423937
DOI 10.1016/j.urolonc.2020.12.019
Web of Science KeyUT 000620260700027
Related Url isVersionOf https://doi.org/10.1016/j.urolonc.2020.12.019
FullText URL fulltext.pdf
Author Inoue, Hirofumi| Tomida, Shuta| Horiguchi, Shigeru| Kato, Hironari| Matsuoka, Hiromi| Sanehira, Etsuko| Matsuoka, Masashi| Yanai, Hiroyuki| Hirasawa, Akira| Toyooka, Shinichi|
Keywords cancer genomic profiling tests formalin‐fixed paraffin‐embedded (FFPE) tumor tissue genomic DNA extraction
Note This is the peer reviewed version of the following article: Hirofumi Inoue et. al. Best practices for the extraction of genomic DNA from formalin‐fixed paraffin‐embedded tumor tissue for cancer genomic profiling tests. Pathology International (2021), which has been published in final form at https://doi.org/10.1111/pin.13086. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions.
This fulltext is available in March 2022.|
Published Date 2021-03-03
Publication Title Pathology International
Volume volume71
Publisher Wiley
Start Page 360
End Page 364
ISSN 1320-5463
NCID AA10984364
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
File Version author
PubMed ID 33657250
DOI 10.1111/pin.13086
Web of Science KeyUT 000624843200001
Related Url isVersionOf https://doi.org/10.1111/pin.13086
FullText URL fulltext.pdf
Author Sasaki, Ryo| Ohta, Yasuyuki| Sato, Kota| Tadokoro, Koh| Takahashi, Yoshiaki| Shang, Jingwei| Takemoto, Mami| Hishikawa, Nozomi| Yamashita, Toru| Ishiura, Hiroyuki| Tsuji, Shoji| Abe, Koji|
Keywords spastic paraplegia extrapyramidal sign frontal cognitive dysfunction
Published Date 2019-11-01
Publication Title Internal Medicine
Volume volume58
Issue issue21
Publisher Japanese Society of Internal Medicine
Start Page 3163
End Page 3165
ISSN 0918-2918
NCID AA10827774
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2019 by The Japanese Society of Internal Medicine
File Version publisher
PubMed ID 31292381
DOI 10.2169/internalmedicine.2765-19
Web of Science KeyUT 000495397000019
Related Url isVersionOf https://doi.org/10.2169/internalmedicine.2765-19
FullText URL fulltext.pdf
Author Uneda, Atsuhito| Kurozumi, Kazuhiko| Fujimura, Atsushi| Fujii, Kentaro| Ishida, Joji| Shimazu, Yosuke| Otani, Yoshihiro| Tomita, Yusuke| Hattori, Yasuhiko| Matsumoto, Yuji| Tsuboi, Nobushige| Makino, Keigo| Hirano, Shuichiro| Kamiya, Atsunori| Date, Isao|
Keywords Differentiated glioblastoma cell Glioblastoma stem cell CCN1 YAP/TAZ TEAD Mesenchymal subtype Macrophage Microenvironment Glioma Glioblastoma
Published Date 2021-02-22
Publication Title Acta Neuropathologica Communications
Volume volume9
Issue issue1
Publisher BMC
Start Page 29
ISSN 2051-5960
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Author(s) 2021.
File Version publisher
PubMed ID 33618763
DOI 10.1186/s40478-021-01124-7
Web of Science KeyUT 000620598700001
Related Url isVersionOf https://doi.org/10.1186/s40478-021-01124-7
FullText URL fulltext.pdf
Author Sato, Keita| Nwe, Khine Nwe| Ohuchi, Hideyo|
Keywords medaka nonimage‐forming photoreception opn3 opsin tmt‐opsin RRID:SCR_018163 RRID:SCR_003070 RRID:SCR_005887 RRID:SCR_004860 RRID:SCR_010279 RRID:AB_2336524 RRID:AB_514497 RRID:AB_514504 RRID:AB_2339038 RRID: AB_840257
Note This is the peer reviewed version of the following article: [Sato, K,  , KNN, Ohuchi, H. The Opsin 3/Teleost multiple tissue opsin system: mRNA localization in the retina and brain of medaka (Oryzias latipes). J Comp Neurol. 2021; 529: 2484– 2516. https://doi.org/10.1002/cne.25106], which has been published in final form at [https://doi.org/10.1002/cne.25106]. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions. This article may not be enhanced, enriched or otherwise transformed into a derivative work, without express permission from Wiley or by statutory rights under applicable legislation. Copyright notices must not be removed, obscured or modified. The article must be linked to Wiley’s version of record on Wiley Online Library and any embedding, framing or otherwise making available the article or pages there of by third parties from platforms, services and websites other than Wiley Online Library must be prohibited.|
Published Date 2021-01-11
Publication Title Journal of Comparative Neurology
Volume volume529
Publisher Wiley
Start Page 2484
End Page 2516
ISSN 0021-9967
NCID AA00695917
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2021 Wiley Periodicals LLC
File Version author
PubMed ID 33427299
DOI 10.1002/cne.25106
Web of Science KeyUT 000611189900001
Related Url isVersionOf https://doi.org/10.1002/cne.25106
FullText URL fulltext.pdf
Author Ishida, Hisashi| Iguchi, Akihiro| Aoe, Michinori| Nishiuchi, Ritsuo| Matsubara, Takehiro| Keino, Dai| Sanada, Masashi| Shimada, Akira|
Keywords leukemia pediatric acute myeloid leukemia molecular genetics precision medicine
Published Date 2020-11
Publication Title Biomedical Reports
Volume volume13
Issue issue5
Publisher Spandidos Publications
Start Page 46
ISSN 2049-9434
NCID AA12610729
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
File Version publisher
PubMed ID 32934818
DOI 10.3892/br.2020.1353
Web of Science KeyUT 000606302400012
Related Url isVersionOf https://doi.org/10.3892/br.2020.1353
FullText URL fulltext.pdf
Author Sato, Kazuhiro|
Keywords Hordeum vulgare genome sequencing genetic resources
Published Date 2020-09-26
Publication Title DNA Research
Volume volume27
Issue issue4
Publisher Oxford University Press
Start Page dsaa023
ISSN 1340-2838
NCID AA11095219
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Author(s) 2020.
File Version publisher
PubMed ID 33524134
DOI 10.1093/dnares/dsaa023
Web of Science KeyUT 000607779900005
Related Url isVersionOf https://doi.org/10.1093/dnares/dsaa023
FullText URL fulltext.pdf
Author Funahashi, Hiroaki|
Note International Conference: Improving Tropical Animal Production for Food Security 22-24 November 2019, South East Sulawesi, Indonesia|
Published Date 2020
Publication Title IOP Conference Series: Earth and Environmental Science
Volume volume465
Publisher IOP Publishing
Start Page 012001
ISSN 1755-1307
Content Type Conference Paper
language English
OAI-PMH Set 岡山大学
File Version publisher
DOI 10.1088/1755-1315/465/1/012001
Web of Science KeyUT 000607205000001
Related Url isVersionOf https://doi.org/10.1088/1755-1315/465/1/012001
Title Alternative A comparative gene analysis reveals a diatom-specific SET domain protein family
FullText URL srfa_110_001_006.pdf
Author Nemoto, Michiko|
Abstract  The silica cell walls of diatoms, which exhibit species-spe-cific micro- and nano- patterned structures are promising candidates for applications in nanotechnology. Previous studies revealed a number of silica cell wall-associated proteins involved in silica formation. However, molecular biological analyses toward understanding of diatom cell wall formation have been mostly limited to model diatom species and general silica formation process in diatoms is still incompletely understood. In this study, to gain a compre-hensive insight into diatom silica biomineralization, tran-scriptome data of three diatom species, Nitzschia palea, Achnanthes kuwaitensis and Pseudoleyanella lunata, were newly developed. The reads obtained from RNA sequencing were assembled into 31,946, 60,767 and 38,314 unique transcripts for N. palea, A. kuwaitensis and P. lunata, respectively. In order to identify the diatom-specific genes, three transcriptome data sets developed in this study and the protein-coding gene sets of five genome-sequenced diatoms were compared. The proteins shared only by eight diatom species that are predicted to possess an endoplasmic reticulum (ER)-targeting signal peptide were selected for further analyses. These include proteins showing homology to silicanin-1, a recently reported diatom-specific protein involved in silica formation, as well as a number of SET domain proteins. The SET domain proteins might be novel diatom-specific family of methyltransferases that may reg-ulate the function of silica formation related proteins or long chain polyamines. The genes encoding the diatom-specific SET domain proteins identified in this study, which were shown to respond to silicon were suggested to be implicated in silica biomineralization.
Keywords Biomineralization Diatom Silica Protein
Publication Title Scientific Reports of the Faculty of Agriculture, Okayama University
Published Date 2021-02-01
Volume volume110
Start Page 1
End Page 6
ISSN 2186-7755
language Japanese
File Version publisher
NAID 120006955817
FullText URL fulltext.pdf
Author Noutoshi, Yoshiteru| Toyoda, Atsushi| Ishii, Tomoya| Saito, Kirara| Watanabe, Megumi| Kawaguchi, Akira|
Keywords bacterial pathogenesis crown gall disease grapevine Rhizobium vitis tumor-inducing plasmid
Published Date 2020-10-01
Publication Title Molecular Plant-Microbe Interactions
Volume volume33
Issue issue11
Publisher American Phytopathological Society
Start Page 1280
End Page 1282
ISSN 0894-0282
NCID AA10671675
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2020 The Author(s).
File Version publisher
PubMed ID 33026970
DOI 10.1094/MPMI-07-20-0180-A
Web of Science KeyUT 000597311000006
Related Url isVersionOf https://doi.org/10.1094/MPMI-07-20-0180-A
FullText URL fulltext.pdf
Author Noutoshi, Yoshiteru| Toyoda, Atsushi| Ishii, Tomoya| Watanabe, Megumi| Kawaguchi, Akira|
Keywords antitumorigenic bacterial strain biological control agent crown gall disease Rhizobium vitis
Published Date 2020-10-07
Publication Title Molecular Plant-Microbe Interactions
Volume volume33
Issue issue12
Publisher American Phytopathological Society
Start Page 1451
End Page 1453
ISSN 0894-0282
NCID AA10671675
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2020 The Author(s).
File Version publisher
PubMed ID 33026970
DOI 10.1094/MPMI-07-20-0181-A
Web of Science KeyUT 000597311800011
Related Url isVersionOf https://doi.org/10.1094/MPMI-07-20-0181-A
FullText URL fulltext.pdf
Author Noutoshi, Yoshiteru| Toyoda, Atsushi| Ishii, Tomoya| Saito, Kirara| Watanabe, Megumi| Kawaguchi, Akira|
Keywords crown gall disease commensalism endophytes grapevine Rhizobium vitis rhizosphere
Published Date 2020-10-01
Publication Title Molecular Plant-Microbe Interactions
Volume volume33
Issue issue11
Publisher American Phytopathological Society
Start Page 1283
End Page 1285
ISSN 0894-0282
NCID AA10671675
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2020 The Author(s).
File Version publisher
PubMed ID 33026970
DOI 10.1094/MPMI-07-20-0182-A
Web of Science KeyUT 000597311000007
Related Url isVersionOf https://doi.org/10.1094/MPMI-07-20-0182-A
FullText URL fulltext.pdf
Author Mochida, Keiichi| Nishii, Ryuei| Hirayama, Takashi|
Keywords Genome to phenome Life-course approach Multi-omics Plant phenomics Sensor.
Published Date 2020-05-11
Publication Title Plant and Cell Physiology
Volume volume61
Issue issue8
Publisher Oxford University Press
Start Page 1408
End Page 1418
ISSN 0032-0781
NCID AA0077511X
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Author(s) 2020.
File Version publisher
PubMed ID 32392328
DOI 10.1093/pcp/pcaa064
Web of Science KeyUT 000593148100005
Related Url isVersionOf https://doi.org/10.1093/pcp/pcaa064
FullText URL fulltext.pdf
Author Tumewu, Stephany Angelia| Ogawa, Yujiro| Okamoto, Takumi| Sugihara, Yuka| Yamada, Hajime| Taguchi, Fumiko| Matsui, Hidenori| Yamamoto, Mikihiro| Noutoshi, Yoshiteru| Toyoda, Kazuhiro| Ichinose, Yuki|
Keywords Bacterial virulence cheA Chemotaxis cheY Flagellar motility Pseudomonas
Note This is a post-peer-review, pre-copyedit version of an article published in Molecular Genetics and Genomics. The final authenticated version is available online at: http://dx.doi.org/10.1007/s00438-020-01745-y.
This fulltext is available in Jan. 2022.|
Published Date 2021-01-02
Publication Title Molecular Genetics and Genomics
Volume volume296
Publisher Springer
Start Page 299
End Page 312
ISSN 1617-4615
NCID AA11547886
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
File Version author
PubMed ID 33386986
DOI 10.1007/s00438-020-01745-y
Web of Science KeyUT 000604185000001
Related Url isVersionOf https://doi.org/10.1007/s00438-020-01745-y
FullText URL s13053-020-00160-z.pdf
Author Abe, Kodai| Ueki, Arisa| Urakawa, Yusaku| Kitago, Minoru| Yoshihama, Tomoko| Nanki, Yoshiko| Kitagawa, Yuko| Aoki, Daisuke| Kosaki, Kenjiro| Hirasawa, Akira|
Keywords Hereditary pancreatic cancer PALB2 NBN
Published Date 2021-01-07
Publication Title Hereditary Cancer in Clinical Practice
Volume volume19
Publisher BMC
Start Page 5
ISSN 1897-4287
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © Authors.
File Version publisher
PubMed ID 33413558
DOI 10.1186/s13053-020-00160-z
Related Url isVersionOf https://doi.org/10.1186/s13053-020-00160-z