Elsevier BV - Publisher List - OKAYAMA UNIVERSITY SCIENTIFIC ACHIEVEMENT REPOSITORY

Immunopeptidomics combined with full-length transcriptomics uncovers diverse neoantigens

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Author	Ishino, Takamasa\| Watanabe, Tomofumi\| Tokita, Serina\| Ueda, Youki\| Kawase, Katsushige\| Takano, Yuka\| Thu, Yin Min\| Suzuki, Yuta\| Owa, Chie\| Inozume, Takashi\| Zhou, Wenhao\| Nagasaki, Joji\| Kochin, Vitaly\| Ueno, Toshihide\| Kojima, Shinya\| Honobe-Tabuchi, Akiko\| Kawamura, Tatsuyoshi\| Ohnuma, Takehiro\| Matsuzawa, Takamitsu\| Kawahara, Yu\| Yamashita, Kazuo\| Lin, Jason\| Koseki, Jun\| Nishikawa, Hiroyoshi\| Araki, Motoo\| Kato, Naoya\| Shimamura, Teppei\| Morishita, Shinichi\| Suzuki, Yutaka\| Mano, Hiroyuki\| Torigoe, Toshihiko\| Kanaseki, Takayuki\| Kawazu, Masahito\| Togashi, Yosuke\|
Keywords	cancer immunology neoantigen long-read RNA sequencing HLA ligandome single-cell RNA sequencing single-cell TCR sequencing exhausted T cell
Published Date	2026-01
Publication Title	Cell Reports
Volume	volume45
Issue	issue1
Publisher	Elsevier BV
Start Page	116781
ISSN	2211-1247
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Author(s).
File Version	publisher
PubMed ID	41447530
DOI	10.1016/j.celrep.2025.116781
Web of Science KeyUT	001654870700001
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Unified 2D polygon-based CAM framework integrating tool path generation, machinability evaluation, and cutting-force simulation

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Author	Kaneko, Kazuki\| Takayasu, Hiroto\| Suzuki, Atsuya\| Kodama, Hiroyuki\|
Keywords	Computer-aided manufacturing (CAM) Polygon Tool path generation Machinability Cutting force prediction
Published Date	2026-03
Publication Title	Results in Engineering
Volume	volume29
Publisher	Elsevier BV
Start Page	108948
ISSN	2590-1230
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2026 The Authors.
File Version	publisher
DOI	10.1016/j.rineng.2025.108948
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Impact of full-time equivalent allocation on the effectiveness of antimicrobial stewardship activities: A multicenter study in Okayama, Japan

Author	Kajita, Shiho\| Hagiya, Hideharu\| Okita, Atsushi\| Haruki, Yuto\| Yamada, Haruto\| Inoue, Yasurou\| Higashionna, Tsukasa\| Satou, Kana\| Torigoe, Fumihiro\| Iwamoto, Shinobu\| Yoshida, Mika\| Yamane, Yumiko\| Kenmotsu, Hiroki\| Sugimura, Satoru\| Fujiwara, Yutaka\| Ikeda, Fusao\| Koyama, Toshihiro\| Yoshida, Chikamasa\| Andou, Shinichirou\| Suwaki, Toshimitsu\|
Keywords	Antimicrobial resistance Antimicrobial stewardship Full-time equivalent Infection prevention and control Trend analysis
Note	© 2025 Japanese Society of Chemotherapy, Japanese Association for Infectious Diseases, and Japanese Society for Infection Prevention and Control. This manuscript version is made available under the CC-BY-NC-ND 4.0 license https://creativecommons.org/licenses/by-nc-nd/4.0/\| This fulltext file will be available in May 2026.\|
Published Date	2025-07
Publication Title	Journal of Infection and Chemotherapy
Volume	volume31
Issue	issue7
Publisher	Elsevier BV
Start Page	102730
ISSN	1341-321X
NCID	AA11057978
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 Japanese Society of Chemotherapy, Japanese Association for Infectious Diseases, and Japanese Society for Infection Prevention and Control.
File Version	author
PubMed ID	40373974
DOI	10.1016/j.jiac.2025.102730
Web of Science KeyUT	001499520800001
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Assessing the role of folate syntrophy and folate cross-feeding in the pathobiology of infectious-inflamed milieu caused by Fusobacterium nucleatum

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Author	Ghadimi, Darab\| Blömer, Sophia\| Şahin Kaya, Aysel\| Krüger, Sandra\| Röcken, Christoph\| Schäfer, Heiner\| Uchiyama, Jumpei\| Matsuzaki, Shigenobu\| Bockelmann, Wilhelm\|
Keywords	Nutrition Metaflammation Folate Cytokines Infection Host cells
Published Date	2026-03
Publication Title	Experimental and Molecular Pathology
Volume	volume145
Publisher	Elsevier BV
Start Page	105021
ISSN	0014-4800
NCID	AA00641168
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Authors.
File Version	publisher
PubMed ID	41496201
DOI	10.1016/j.yexmp.2025.105021
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Whole-genome sequencing and in vitro characterization of a disseminated ST398 Staphylococcus aureus infection: A case report

Author	Sazumi, Yosuke\| Fukushima, Shinnosuke\| Hagiya, Hideharu\| Kato, Atsushi\| Suyama, Atsuhito\| Oguni, Kohei\| Gotoh, Kazuyoshi\| Kutsuno, Shoko\| Hisatsune, Junzo\| Sugai, Motoyuki\| Tsuji, Shuma\| Iio, Koji\| Otsuka, Fumio\|
Keywords	Staphylococcus aureus Sequence type 398 Disseminated infection Immune evasion cluster gene
Note	© 2025 Japanese Society of Chemotherapy, Japanese Association for Infectious Diseases, and Japanese Society for Infection Prevention and Control. This manuscript version is made available under the CC-BY-NC-ND 4.0 license https://creativecommons.org/licenses/by-nc-nd/4.0/\| This fulltext file will be available in Oct. 2026.\|
Published Date	2025-12
Publication Title	Journal of Infection and Chemotherapy
Volume	volume31
Issue	issue12
Publisher	Elsevier BV
Start Page	102845
ISSN	1341-321X
NCID	AA11057978
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 Japanese Society of Chemotherapy, Japanese Association for Infectious Diseases, and Japanese Society for Infection Prevention and Control.
File Version	author
PubMed ID	41161474
DOI	10.1016/j.jiac.2025.102845
Web of Science KeyUT	001611880300001
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Clinical and molecular characteristics of urinary catheter-associated Pseudomonas aeruginosa prostatic infection: A case series of four postoperative nosocomial infections

Author	Fukushima, Shinnosuke\| Sano, Takayuki\| Kashimoto, Takashige\| Hagiya, Hideharu\|
Keywords	Pseudomonas aeruginosa Catheter-associated urinary tract infection Prostatic abscess Type III secretion system
Note	© 2025 Japanese Society of Chemotherapy, Japanese Association for Infectious Diseases, and Japanese Society for Infection Prevention and Control. This manuscript version is made available under the CC-BY-NC-ND 4.0 license https://creativecommons.org/licenses/by-nc-nd/4.0/\| This fulltext file will be available in Nov. 2026.\|
Published Date	2025-12
Publication Title	Journal of Infection and Chemotherapy
Volume	volume31
Issue	issue12
Publisher	Elsevier BV
Start Page	102853
ISSN	1341-321X
NCID	AA11057978
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 Japanese Society of Chemotherapy, Japanese Association for Infectious Diseases, and Japanese Society for Infection Prevention and Control.
File Version	author
PubMed ID	41224175
DOI	10.1016/j.jiac.2025.102853
Web of Science KeyUT	001620607800001
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Cerebellar abscess caused by Cladophialophora bantiana involving an elderly Japanese woman

Author	Nakamoto, Kenta\| Hagiya, Hideharu\| Fukushima, Shinnosuke\| Oguni, Kohei\| Yokoyama, Yukika\| Iio, Koji\| Hirano, Shuichiro\| Yaguchi, Takashi\| Ban, Sayaka\| Watanabe, Akira\| Okunobu, Hiroki\| Suyama, Atsuhito\| Kawaguchi, Marina\| Sazumi, Yousuke\| Otsuka, Fumio\|
Keywords	Brain abscess Cladophialophora bantiana Black fungus Phaeohyphomycosis Posaconazole
Note	© 2025 SFMM. This manuscript version is made available under the CC-BY-NC-ND 4.0 license https://creativecommons.org/licenses/by-nc-nd/4.0/\| This fulltext file will be available in Mar. 2026.\|
Published Date	2025-06
Publication Title	Journal of Medical Mycology
Volume	volume35
Issue	issue2
Publisher	Elsevier BV
Start Page	101548
ISSN	1156-5233
NCID	AA11001383
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 SFMM.
File Version	author
PubMed ID	40168940
DOI	10.1016/j.mycmed.2025.101548
Web of Science KeyUT	001460918900001
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Deciphering the structural impact of norepinephrine analog radiopharmaceuticals on organic cation transporter affinity

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Author	Mühlig, Saskia\| Chen, Xinyu\| Tutov, Anna\| Nose, Naoko\| Lapa, Constantin\| Werner, Rudolf A.\| Decker, Michael\| Higuchi, Takahiro\|
Keywords	Norepinephrine transporter Organic cation transporter Neuroendocrine tumor Competitive cell uptake PET radiotracer
Published Date	2025-12
Publication Title	Biomedicine & Pharmacotherapy
Volume	volume193
Publisher	Elsevier BV
Start Page	118724
ISSN	0753-3322
NCID	AA10506249
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Author(s).
File Version	publisher
PubMed ID	41172956
DOI	10.1016/j.biopha.2025.118724
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Time to positivity for differentiating blood culture contamination: A 20-hour cutoff for major contaminants

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Author	Manabe, Yohei\| Hagiya, Hideharu\| Fukushima, Shinnosuke\| Nakamoto, Kenta\| Oguni, Kohei\| Akazawa, Hidemasa\| Fujita, Yasushi\| Kiguchi, Takashi\| Iio, Koji\|
Keywords	Bacteremia Blood stream infection Contamination Incubation time Time to positivity
Published Date	2025-12
Publication Title	Diagnostic Microbiology and Infectious Disease
Volume	volume113
Issue	issue4
Publisher	Elsevier BV
Start Page	117030
ISSN	0732-8893
NCID	AA10623322
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Author(s).
File Version	publisher
PubMed ID	40768822
DOI	10.1016/j.diagmicrobio.2025.117030
Web of Science KeyUT	001614938400001
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Should Japanese athletes undergo booster vaccination for pertussis?

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Author	Hagiya, Hideharu\|
Keywords	Bordetella pertussis Vaccination Immunization
Published Date	2025-09
Publication Title	IJID Regions
Volume	volume16
Publisher	Elsevier BV
Start Page	100718
ISSN	2772-7076
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Author(s).
File Version	publisher
PubMed ID	40893803
DOI	10.1016/j.ijregi.2025.100718
Web of Science KeyUT	001560605300001
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Severe Intracranial Infection

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Author	Fukushima, Shinnosuke\| Fujimori, Takumi\| Iio, Koji\| Hagiya, Hideharu\|
Keywords	bloodstream infection brain abscess mixed infection
Published Date	2025-02
Publication Title	JACEP Open
Volume	volume6
Issue	issue1
Publisher	Elsevier BV
Start Page	100026
ISSN	2688-1152
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2024 The Author(s).
File Version	publisher
PubMed ID	40012669
DOI	10.1016/j.acepjo.2024.100026
Web of Science KeyUT	001443867900001
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Feasibility and Diagnostic Utility of Mucosal T-Cell Flow Cytometry for Intestinal Graft-Versus-Host Disease

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Author	Iwamuro, Masaya\| Kondo, Takumi\| Ennishi, Daisuke\| Fujii, Nobuharu\| Hiramatsu, Mai\| Hirabata, Araki\| Takahashi, Takahide\| Tanaka, Takehiro\| Maeda, Yoshinobu\| Otsuka, Motoyuki\|
Keywords	cytomegalovirus infection flow cytometry graft-versus-host disease hematopoietic stem cell transplantation T lymphocytes
Published Date	2026
Publication Title	Gastro Hep Advances
Volume	volume5
Issue	issue2
Publisher	Elsevier BV
Start Page	100820
ISSN	2772-5723
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Authors.
File Version	publisher
PubMed ID	41362823
DOI	10.1016/j.gastha.2025.100820
Web of Science KeyUT	001627799300001
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A multi-institutional dummy run on segmentation variability and plan quality of stereotactic body radiotherapy for oligometastatic disease

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Author	Hirashima, Hideaki\| Matsuo, Yukinori\| Ishikura, Satoshi\| Nakamura, Mitsuhiro\| Nishibuchi, Ikuno\| Kawahara, Daisuke\| Shimada, Yoshihisa\| Nakahara, Yoshiro\| Nishio, Teiji\| Shikama, Naoto\| Watanabe, Shun-ichi\| Okamoto, Isamu\| Ishiba, Toshiyuki\| Hara, Fumikata\| Shien, Tadahiko\| Mizowaki, Takashi\|
Keywords	Oligometastatic disease Dummy run Segmentation variability Dose distribution accuracy
Published Date	2025-10
Publication Title	Physics and Imaging in Radiation Oncology
Volume	volume36
Publisher	Elsevier BV
Start Page	100857
ISSN	2405-6316
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Author(s).
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PubMed ID	41323213
DOI	10.1016/j.phro.2025.100857
Web of Science KeyUT	001621253100001
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Genetic variability in Neisseria meningitidis strains isolated in a Japanese hospital

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Author	Gotoh, Kazuyoshi\| Fukushima, Shinnosuke\| Hagiya, Hideharu\| Tsuji, Shuma\| Iio, Koji\| Matsushita, Osamu\|
Keywords	Antimicrobial resistance Invasive meningococcal disease Drug-resistant gene Genome sequence
Published Date	2025-03
Publication Title	IJID Regions
Volume	volume14
Publisher	Elsevier BV
Start Page	100511
ISSN	2772-7076
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2024 The Author(s).
File Version	publisher
PubMed ID	39835185
DOI	10.1016/j.ijregi.2024.100511
Web of Science KeyUT	001410378200001
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Detection of the nuclear translocation of androgen receptor using quantitative and automatic cell imaging analysis

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Author	Bai, Lanlan\| Wu, Tao\| Fukasawa, Mizuki\| Kashiwagi, Sayo\| Tate, Haruka\| Ozaki, Taku\| Sugano, Eriko\| Tomita, Hiroshi\| Ishii, Tsuyoshi\| Akashi, Takuya\| Fukuda, Tomokazu\|
Keywords	Dermal papilla cell Nuclear translocation Androgen receptor Live cell imaging Digital image analysis Quantitation algorithm
Published Date	2025-04
Publication Title	Tissue and Cell
Volume	volume93
Publisher	Elsevier BV
Start Page	102631
ISSN	0040-8166
NCID	AA00863829
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2024 The Author(s).
File Version	publisher
PubMed ID	39718068
DOI	10.1016/j.tice.2024.102631
Web of Science KeyUT	001393720800001
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Flash vaporization and migration of iodine in the oceanic plate subduction zone

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Author	Suzuki, Noriyuki\| Kameda, Jun\| Amo, Miki\|
Keywords	Iodine circulation Flash vaporization Microbial methane Thermogenic methane Thermogenic hydrogen Subducted sediments
Published Date	2025-11
Publication Title	Chemical Geology
Volume	volume695
Publisher	Elsevier BV
Start Page	123031
ISSN	0009-2541
NCID	AA0060201X
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Authors.
File Version	publisher
DOI	10.1016/j.chemgeo.2025.123031
Web of Science KeyUT	001582737200001
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Clinical outcomes of Japanese patients treated with out-of-specification tisagenlecleucel in a phase 3b trial

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Author	Kato, Koji\| Kato, Jun\| Goto, Hideki\| Kobayashi, Takeshi\| Takahashi, Yoshiyuki\| Sakaida, Emiko\| Hiramatsu, Hidefumi\| Yamamoto, Masahide\| Yoshihara, Satoshi\| Ando, Jun\| Koh, Katsuyoshi\| Fukushima, Kentaro\| Iwamoto, Fumiko\| Tiwari, Ranjan\| Fujii, Nobuharu\|
Keywords	CAR-T DLBCL Out-of-specification Safety Tisagenlecleucel
Published Date	2025-08
Publication Title	Cytotherapy
Volume	volume27
Issue	issue8
Publisher	Elsevier BV
Start Page	938
End Page	943
ISSN	1465-3249
NCID	AA1155966X
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 International Society for Cell & Gene Therapy.
File Version	publisher
PubMed ID	40377509
DOI	10.1016/j.jcyt.2025.04.067
Web of Science KeyUT	001542151300007
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Improvement of anodic oxide film characteristics of Al-Cu alloy by refinement of IMCs with large-area electron beam irradiation

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Author	Shinonaga, T.\| Sebe, A.\| Taniguchi, M.\| Fujii, T.\| Okada, A.\|
Keywords	Electron beam aluminum anodic oxide film
Published Date	2025
Publication Title	CIRP Annals
Volume	volume74
Issue	issue1
Publisher	Elsevier BV
Start Page	263
End Page	267
ISSN	0007-8506
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Authors.
File Version	publisher
DOI	10.1016/j.cirp.2025.04.008
Web of Science KeyUT	001538370200001
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Association between adjuvant chemotherapy and outcomes in resected locoregional recurrence of hormone receptor-positive HER2-negative breast cancer: a multi-institutional retrospective study

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Author	Ozaki, Y.\| Tokuda, E.\| Sagara, Y.\| Hara, F.\| Sasada, S.\| Sawaki, M.\| Kanbayashi, C.\| Yamanaka, T.\| Onishi, T.\| Fujiki, Y.\| Suto, A.\| Takahashi, Y.\| Tokunaga, E.\| Aruga, T.\| Nakamura, R.\| Fujisawa, T.\| Saji, S.\| Iwata, H.\| Shien, T.\|
Keywords	breast cancer locoregional recurrence adjuvant chemotherapy inverse probability of treatment weighting
Published Date	2025-11
Publication Title	ESMO Open
Volume	volume10
Issue	issue11
Publisher	Elsevier BV
Start Page	105889
ISSN	2059-7029
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2025 The Author(s).
File Version	publisher
PubMed ID	41205354
DOI	10.1016/j.esmoop.2025.105889
Web of Science KeyUT	001617317900002
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Longitudinal-field fidelity susceptibility analysis of the 𝐽1-𝐽2 transverse-field Ising model around 𝐽2∕𝐽1 ≈ 0.5

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Author	Nishiyama, Yoshihiro\|
Keywords	05.50.+q 05.10.-a 05.70.Jk 64.60.-i
Published Date	2026-02
Publication Title	Physica A: Statistical Mechanics and its Applications
Volume	volume684
Publisher	Elsevier BV
Start Page	131245
ISSN	0378-4371
NCID	AA11252758
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2026 The Author.
File Version	publisher
DOI	10.1016/j.physa.2025.131245
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